STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC4H2Zinc finger C4H2-type containing. (224 aa)    
Predicted Functional Partners:
RNF220
Ring finger protein 220.
    
 
 0.984
ACOT9
acyl-CoA thioesterase 9.
    
   0.900
HIBCH
3-hydroxyisobutyryl-CoA hydrolase.
    
   0.777
HOOK3
Hook microtubule tethering protein 3.
    
   0.764
ACOT11
acyl-CoA thioesterase 11.
    
   0.749
ACOT12
acyl-CoA thioesterase 12.
    
   0.749
ACOT7
acyl-CoA thioesterase 7.
    
   0.749
C12orf10
Chromosome 12 open reading frame 10.
    
   0.743
RLIM
Ring finger protein, LIM domain interacting.
    
 
 0.632
OPHN1
Oligophrenin 1.
      
 0.596
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.