STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRFBP1Serum response factor binding protein 1. (428 aa)    
Predicted Functional Partners:
BYSL
Bystin like.
   
 
 0.986
POLRMT
RNA polymerase mitochondrial.
   
 0.970
DDX10
DEAD-box helicase 10.
  
 
 0.956
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  0.920
WDR36
WD repeat domain 36.
   
  0.903
ENSCWAP00000028571
annotation not available
   
 0.891
WDR3
WD repeat domain 3.
   
  0.883
BMS1
BMS1 ribosome biogenesis factor.
   
  0.877
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 
 0.864
UTP6
UTP6 small subunit processome component.
   
  0.859
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.