Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FNDC3AFibronectin type III domain containing 3A. (1199 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
   0.795
PSD3
Pleckstrin and Sec7 domain containing 3.
      
 0.651
FKBP4
FKBP prolyl isomerase 4.
    
 
 0.637
ITM2B
Integral membrane protein 2B.
    
 
 0.632
TENT5C
Terminal nucleotidyltransferase 5C.
    
 
 0.614
CDADC1
Cytidine and dCMP deaminase domain containing 1.
      
 0.613
FBLN7
Fibulin 7.
    
 
 0.602
MLN
Motilin.
      
 0.589
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
    
 
 0.586
TENT5D
Terminal nucleotidyltransferase 5D.
    
 
 0.577
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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