Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MADCAM1Mucosal vascular addressin cell adhesion molecule 1. (395 aa)    
Predicted Functional Partners:
SELL
Selectin L.
     
 0.911
ITGA4
Integrin subunit alpha 4.
     
  0.890
ITGB7
Integrin subunit beta 7.
     
 0.890
SELE
Selectin E.
     
 0.826
SELP
Selectin P.
     
 0.826
ITGA9
Integrin subunit alpha 9.
     
  0.825
ITGB2
Integrin subunit beta 2.
     
 0.812
ITGB1
Integrin subunit beta 1.
     
  0.812
ENSCWAP00000025659
annotation not available
     
  0.646
ITGB5
Integrin subunit beta 5.
     
  0.646
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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