Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GGA2Golgi associated, gamma adaptin ear containing, ARF binding protein 2. (614 aa)    
Predicted Functional Partners:
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
   
  0.994
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
   
  0.994
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.981
IGF2R
Insulin like growth factor 2 receptor.
    
 
 0.977
SORT1
Sortilin 1.
    
 
 0.966
CLINT1
Clathrin interactor 1.
    
 
 0.944
CLTC
Clathrin heavy chain.
    
 
 0.944
SORL1
Sortilin related receptor 1.
    
 
 0.918
ENSCWAP00000008565
annotation not available
    
 0.904
BACE1
Beta-secretase 1.
    
 0.878
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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