Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPT2Glutamic--pyruvic transaminase 2. (525 aa)    
Predicted Functional Partners:
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.988
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.988
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 0.953
AGXT2
Alanine--glyoxylate aminotransferase 2.
   
 0.942
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
   
 0.936
FH
Fumarate hydratase.
   
 0.930
IDH3A
Isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha.
  
 0.930
ENSCWAP00000004776
annotation not available
     
 0.929
IDH2
Isocitrate dehydrogenase (NADP(+)) 2.
   
 
 0.924
LDHB
Lactate dehydrogenase B.
   
 0.922
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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