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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPT2Glutamic--pyruvic transaminase 2. (525 aa)    
Predicted Functional Partners:
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 
 0.992
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.991
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 0.956
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
   
 0.954
AGXT2
Alanine--glyoxylate aminotransferase 2.
   
 0.934
FH
Fumarate hydratase.
   
 0.927
ENSCWAP00000004776
annotation not available
   
 
 0.924
IDH2
Isocitrate dehydrogenase (NADP(+)) 2.
   
 
 0.923
IDH1
Isocitrate dehydrogenase (NADP(+)) 1.
   
 
 0.922
NAGS
N-acetylglutamate synthase.
  
 
 0.919
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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