STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPBGLTrophoblast glycoprotein like. (387 aa)    
Predicted Functional Partners:
NTNG1
Netrin G1.
    
 0.706
MST1R
Macrophage stimulating 1 receptor.
  
 
 0.627
LRRC3
Leucine rich repeat containing 3.
    
 0.573
TONSL
Tonsoku like, DNA repair protein.
    
  0.544
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.535
EEF1G
Eukaryotic translation elongation factor 1 gamma.
    
 0.523
METTL27
Methyltransferase like 27.
    
 
 0.520
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.511
SFRP2
Secreted frizzled related protein 2.
    
 
 0.505
IQCD
IQ motif containing D.
    
 
 0.488
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.