Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNNT2Troponin T2, cardiac type. (292 aa)    
Predicted Functional Partners:
TNNI3
Troponin I3, cardiac type.
   
 0.998
TNNI1
Troponin I1, slow skeletal type.
  
 0.995
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.995
TNNI2
Troponin I2, fast skeletal type.
   
 0.992
TNNC2
Troponin C2, fast skeletal type.
   
 0.983
TPM1
Tropomyosin 1.
   
 0.972
TPM2
Tropomyosin 2.
   
 0.970
TPM4
Tropomyosin 4.
   
 0.967
MYL1
Myosin light chain 1.
   
 0.953
MYH7
Myosin heavy chain 7.
   
 0.937
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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