Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC22BSEC22 homolog B, vesicle trafficking protein (gene/pseudogene). (215 aa)    
Predicted Functional Partners:
STX5
Syntaxin 5.
   
 0.999
BET1
Bet1 golgi vesicular membrane trafficking protein.
   
 0.998
ENSCWAP00000021969
annotation not available
   
 0.998
STX18
Syntaxin 18.
   
 0.998
BNIP1
BCL2 interacting protein 1.
    
 0.996
SCFD1
Sec1 family domain containing 1.
   
 0.994
YKT6
YKT6 v-SNARE homolog.
    
 0.991
GOSR1
Golgi SNAP receptor complex member 1.
    
 
 0.987
STX7
Syntaxin 7.
    
 0.986
NBAS
NBAS subunit of NRZ tethering complex.
    
 0.986
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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