Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIP4Thyroid hormone receptor interactor 4. (538 aa)    
Predicted Functional Partners:
ASCC2
Activating signal cointegrator 1 complex subunit 2.
   
 0.999
ASCC3
Activating signal cointegrator 1 complex subunit 3.
   
 0.999
ASCC1
Activating signal cointegrator 1 complex subunit 1.
   
 
 0.981
MED4
Mediator complex subunit 4.
    
 
 0.959
HFM1
Helicase for meiosis 1.
   
 0.956
MED1
Mediator complex subunit 1.
    
 
 0.950
ALKBH3
alkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
    
 
 0.949
MED23
Mediator complex subunit 23.
    
   0.948
MED11
Mediator complex subunit 11.
    
   0.948
MED24
Mediator complex subunit 24.
    
   0.948
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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