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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PURBPurine rich element binding protein B. (306 aa)    
Predicted Functional Partners:
TMEM248
Transmembrane protein 248.
      
 0.739
NMT1
N-myristoyltransferase 1.
      
 0.595
KLF12
Kruppel like factor 12.
      
 0.595
LPGAT1
Lysophosphatidylglycerol acyltransferase 1.
      
 0.594
DENND5B
DENN domain containing 5B.
      
 0.583
DHX36
DEAH-box helicase 36.
      
 0.555
MFSD13A
Major facilitator superfamily domain containing 13A.
      
 0.553
ZNF609
Zinc finger protein 609.
   
  
 0.548
ZMIZ2
Zinc finger MIZ-type containing 2.
   
  
 0.540
FAM110B
Family with sequence similarity 110 member B.
      
 0.531
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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