Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000002640annotation not available (110 aa)    
Predicted Functional Partners:
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.995
TRAF6
TNF receptor associated factor 6.
    
 0.992
RNF168
Ring finger protein 168.
    
 0.982
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
   
 0.980
UBB
Ubiquitin B.
   
 0.972
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
    
 0.971
HLTF
Helicase like transcription factor.
    
 0.967
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.965
BRCA1
BRCA1 DNA repair associated.
    
 0.962
ENSCWAP00000007138
annotation not available
   
 0.961
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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