STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC125Coiled-coil domain containing 125. (508 aa)    
Predicted Functional Partners:
TACC1
Transforming acidic coiled-coil containing protein 1.
      
 0.694
CCDC149
Coiled-coil domain containing 149.
      
 0.693
ENSCWAP00000021923
annotation not available
      
 0.663
POLR2B
RNA polymerase II subunit B.
      
 0.648
CCDC92
Coiled-coil domain containing 92.
      
 0.622
RASL11B
RAS like family 11 member B.
      
 0.621
ENSCWAP00000004567
annotation not available
      
 0.611
CCDC113
Coiled-coil domain containing 113.
      
 0.602
EPSTI1
Epithelial stromal interaction 1.
      
 0.587
PARP8
poly(ADP-ribose) polymerase family member 8.
      
 0.587
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.