STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDHDLactate dehydrogenase D. (484 aa)    
Predicted Functional Partners:
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
     
 0.935
LDHB
Lactate dehydrogenase B.
   
 0.928
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
 0.925
PDHA1
Pyruvate dehydrogenase E1 alpha 1 subunit.
  
 0.922
HAGH
Hydroxyacylglutathione hydrolase.
    
 0.917
LDHC
Lactate dehydrogenase C.
   
 0.916
ENSCWAP00000019742
annotation not available
   
 0.916
PDHB
Pyruvate dehydrogenase E1 beta subunit.
    
 0.913
GPT2
Glutamic--pyruvic transaminase 2.
  
 
 0.912
AGXT2
Alanine--glyoxylate aminotransferase 2.
  
 
 0.909
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.