Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PBDC1Polysaccharide biosynthesis domain containing 1. (244 aa)    
Predicted Functional Partners:
TTLL12
Tubulin tyrosine ligase like 12.
    
   0.948
MAPT
Microtubule associated protein tau.
    
   0.795
ENSCWAP00000003773
annotation not available
    
   0.787
ENSCWAP00000004298
annotation not available
    
   0.787
ENSCWAP00000010490
annotation not available
    
   0.787
EEF1A2
Eukaryotic translation elongation factor 1 alpha 2.
    
   0.787
ENSCWAP00000019350
annotation not available
    
   0.787
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.722
PFDN2
Prefoldin subunit 2.
   
    0.707
PFDN6
Prefoldin subunit 6.
   
    0.690
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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