close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBDC1Polysaccharide biosynthesis domain containing 1. (244 aa)    
Predicted Functional Partners:
TTLL12
Tubulin tyrosine ligase like 12.
    
   0.767
IMPA2
Inositol monophosphatase 2.
      
 0.744
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.699
LRRC42
Leucine rich repeat containing 42.
      
 0.666
MPLKIP
M-phase specific PLK1 interacting protein.
      
 0.656
ENSCWAP00000001391
annotation not available
   
    0.602
ENSCWAP00000001917
annotation not available
   
    0.602
DPF1
Double PHD fingers 1.
      
 0.602
PFDN2
Prefoldin subunit 2.
   
    0.601
LSM14B
LSM family member 14B.
      
 0.598
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.