Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMA2Laminin subunit alpha 2. (3127 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
    
 0.979
ITGA7
Integrin subunit alpha 7.
    
 0.952
ITGA5
Integrin subunit alpha 5.
    
 0.945
ITGA6
Integrin subunit alpha 6.
    
 0.936
ITGA1
Integrin subunit alpha 1.
    
 0.935
ITGAV
Integrin subunit alpha V.
    
 0.934
LAMC1
Laminin subunit gamma 1.
   
 0.934
ITGA9
Integrin subunit alpha 9.
    
 0.926
ITGA8
Integrin subunit alpha 8.
    
 0.924
ITGA3
Integrin subunit alpha 3.
    
 0.924
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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