Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FIGNFidgetin, microtubule severing factor. (759 aa)    
Predicted Functional Partners:
IST1
IST1 factor associated with ESCRT-III.
    
 0.960
ENSCWAP00000026989
annotation not available
   
 0.888
C1orf112
Chromosome 1 open reading frame 112.
   
 0.885
SPIDR
Scaffold protein involved in DNA repair.
    
 0.861
CHMP1A
Charged multivesicular body protein 1A.
    
 0.832
NME8
NME/NM23 family member 8.
    
 
 0.808
RAD51
RAD51 recombinase.
   
 0.801
ENSCWAP00000026214
annotation not available
    
 
 0.799
NUP133
Nucleoporin 133.
   
   0.760
NUP107
Nucleoporin 107.
   
   0.760
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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