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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFP1ZFP1 zinc finger protein. (407 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
  0.971
MAP3K20
Mitogen-activated protein kinase kinase kinase 20.
    
   0.928
TRIM33
Tripartite motif containing 33.
    
  0.906
TRIM24
Tripartite motif containing 24.
    
  0.867
IPO7
Importin 7.
    
 
 0.815
IPO8
Importin 8.
    
 
 0.808
CBX5
Chromobox 5.
    
   0.795
SESN3
Sestrin 3.
    
  0.776
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
    
   0.760
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.629
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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