STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERECatsper channel auxiliary subunit epsilon. (951 aa)    
Predicted Functional Partners:
ENSCWAP00000023291
annotation not available
  
 
 0.984
CATSPER2
Cation channel sperm associated 2.
    
 0.978
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
  
 
 0.970
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
  
 
0.959
CATSPER3
Cation channel sperm associated 3.
    
 0.958
CATSPER1
Cation channel sperm associated 1.
    
 0.955
CATSPER4
Cation channel sperm associated 4.
    
 0.950
EFCAB9
EF-hand calcium binding domain 9.
    
 0.944
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
 0.924
TMEM249
Transmembrane protein 249.
  
 
 
 0.924
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.