Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITFG1Integrin alpha FG-GAP repeat containing 1. (611 aa)    
Predicted Functional Partners:
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
    
   0.795
SLC24A3
Solute carrier family 24 member 3.
      
 0.767
RELL1
RELT like 1.
      
 0.754
HAUS2
HAUS augmin like complex subunit 2.
      
 0.737
ABTB2
Ankyrin repeat and BTB domain containing 2.
      
 0.696
NME4
NME/NM23 nucleoside diphosphate kinase 4.
    
 
 0.682
RUVBL2
RuvB like AAA ATPase 2.
    
 
 0.673
RUVBL1
RuvB like AAA ATPase 1.
    
 
 0.663
DENND5B
DENN domain containing 5B.
      
 0.652
PHKB
Phosphorylase kinase regulatory subunit beta.
   
  
 0.645
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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