HEPHL1 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-expression

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[Homology]

Score

HEPHL1

Hephaestin like 1. (1102 aa)

Predicted Functional Partners:

FECH

0.946

HMOX2

0.900

HMOX1

0.900

FXN

0.896

HEPH

0.890

SLC40A1

0.878

CP

0.869

FTMT

0.858

ENSCWAP00000005646

0.857

ENSCWAP00000016492

0.857

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CP	ENSCWAP00000005646	ENSCWAP00000020957	ENSCWAP00000005646	Ceruloplasmin.	annotation not available	0.849
CP	ENSCWAP00000016492	ENSCWAP00000020957	ENSCWAP00000016492	Ceruloplasmin.	annotation not available	0.849
CP	FECH	ENSCWAP00000020957	ENSCWAP00000003233	Ceruloplasmin.	Ferrochelatase.	0.931
CP	FTMT	ENSCWAP00000020957	ENSCWAP00000002473	Ceruloplasmin.	Ferritin mitochondrial.	0.854
CP	FXN	ENSCWAP00000020957	ENSCWAP00000025209	Ceruloplasmin.	Frataxin.	0.896
CP	HEPH	ENSCWAP00000020957	ENSCWAP00000002236	Ceruloplasmin.	Hephaestin.	0.869
CP	HEPHL1	ENSCWAP00000020957	ENSCWAP00000002686	Ceruloplasmin.	Hephaestin like 1.	0.869
CP	HMOX1	ENSCWAP00000020957	ENSCWAP00000027885	Ceruloplasmin.	Heme oxygenase 1.	0.903
CP	HMOX2	ENSCWAP00000020957	ENSCWAP00000005337	Ceruloplasmin.	Heme oxygenase 2.	0.900
CP	SLC40A1	ENSCWAP00000020957	ENSCWAP00000013150	Ceruloplasmin.	Solute carrier family 40 member 1.	0.934
ENSCWAP00000005646	CP	ENSCWAP00000005646	ENSCWAP00000020957	annotation not available	Ceruloplasmin.	0.849
ENSCWAP00000005646	FECH	ENSCWAP00000005646	ENSCWAP00000003233	annotation not available	Ferrochelatase.	0.858
ENSCWAP00000005646	FTMT	ENSCWAP00000005646	ENSCWAP00000002473	annotation not available	Ferritin mitochondrial.	0.976
ENSCWAP00000005646	FXN	ENSCWAP00000005646	ENSCWAP00000025209	annotation not available	Frataxin.	0.938
ENSCWAP00000005646	HEPH	ENSCWAP00000005646	ENSCWAP00000002236	annotation not available	Hephaestin.	0.873
ENSCWAP00000005646	HEPHL1	ENSCWAP00000005646	ENSCWAP00000002686	annotation not available	Hephaestin like 1.	0.857
ENSCWAP00000005646	HMOX1	ENSCWAP00000005646	ENSCWAP00000027885	annotation not available	Heme oxygenase 1.	0.907
ENSCWAP00000005646	HMOX2	ENSCWAP00000005646	ENSCWAP00000005337	annotation not available	Heme oxygenase 2.	0.872
ENSCWAP00000005646	SLC40A1	ENSCWAP00000005646	ENSCWAP00000013150	annotation not available	Solute carrier family 40 member 1.	0.587
ENSCWAP00000016492	CP	ENSCWAP00000016492	ENSCWAP00000020957	annotation not available	Ceruloplasmin.	0.849