STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPC7Transient receptor potential cation channel subfamily C member 7. (862 aa)    
Predicted Functional Partners:
TRPC1
Transient receptor potential cation channel subfamily C member 1.
    
 0.963
PRKCG
Protein kinase C gamma.
   
 0.903
PRKCA
Protein kinase C alpha.
   
 0.892
PRKCB
Protein kinase C beta.
   
 0.887
TRPC4
Transient receptor potential cation channel subfamily C member 4.
   
 0.852
BMPR2
Bone morphogenetic protein receptor type 2.
    
 0.851
TRPC5
Transient receptor potential cation channel subfamily C member 5.
   
 0.844
TRPC6
Transient receptor potential cation channel subfamily C member 6.
    
 0.837
RORA
RAR related orphan receptor A.
     
  0.834
KAT5
Lysine acetyltransferase 5.
     
  0.834
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.