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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCLRE1CDNA cross-link repair 1C. (688 aa)    
Predicted Functional Partners:
XRCC5
X-ray repair cross complementing 5.
  
 
 0.998
XRCC6
X-ray repair cross complementing 6.
   
 0.995
LIG4
DNA ligase 4.
   
 0.982
NHEJ1
Non-homologous end joining factor 1.
   
 
 0.943
MSH2
mutS homolog 2.
   
 0.942
MSH6
mutS homolog 6.
   
 0.931
FANCD2
FA complementation group D2.
   
 0.931
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.930
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.929
XRCC1
X-ray repair cross complementing 1.
     
 0.925
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.