STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHF11PHD finger protein 11. (319 aa)    
Predicted Functional Partners:
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.825
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
     
 0.815
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.795
RCBTB2
RCC1 and BTB domain containing protein 2.
      
 0.781
ANKRD17
Ankyrin repeat domain 17.
    
 
 0.770
MMD
Monocyte to macrophage differentiation associated.
      
 0.738
CAB39L
Calcium binding protein 39 like.
    
 0.733
KDM6B
Lysine demethylase 6B.
   
 0.728
KDM6A
Lysine demethylase 6A.
   
 0.728
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.703
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.