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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.792
RSPRY1
Ring finger and SPRY domain containing 1.
    
 
 0.761
OR6N2
Olfactory receptor family 6 subfamily N member 2.
      
 0.753
OR6N1
Olfactory receptor family 6 subfamily N member 1.
      
 0.752
IP6K2
Inositol hexakisphosphate kinase 2.
      
 0.745
GTF3C1
General transcription factor IIIC subunit 1.
      
 0.740
TPRA1
Transmembrane protein adipocyte associated 1.
   
  
 0.738
NUDT13
Nudix hydrolase 13.
      
 0.738
FBXO9
F-box protein 9.
      
 0.728
CCDC106
Coiled-coil domain containing 106.
      
 0.722
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.