Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNCAIPSynuclein alpha interacting protein. (1013 aa)    
Predicted Functional Partners:
ENSCWAP00000003047
annotation not available
    
 0.996
ENSCWAP00000028050
annotation not available
    
 0.994
SNCA
Synuclein alpha.
    
 0.991
SIAH1
Siah E3 ubiquitin protein ligase 1.
    
 0.933
SNCG
Synuclein gamma.
    
 0.931
NUB1
Negative regulator of ubiquitin like proteins 1.
    
 
 0.904
SIAH2
Siah E3 ubiquitin protein ligase 2.
    
 0.838
SH3BP5L
SH3 binding domain protein 5 like.
    
 
 0.812
GRAMD2B
GRAM domain containing 2B.
    
 
 0.690
SNCB
Synuclein beta.
    
 
 0.688
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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