Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PGGHGProtein-glucosylgalactosylhydroxylysine glucosidase. (691 aa)    
Predicted Functional Partners:
ENSCWAP00000017896
annotation not available
  
 0.966
YIPF6
Yip1 domain family member 6.
  
 0.947
PUDP
Pseudouridine 5'-phosphatase.
  
 
 0.889
PKP3
Plakophilin 3.
      
 0.859
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
    
 0.847
GALM
Galactose mutarotase.
  
 
 0.824
GBE1
1,4-alpha-glucan branching enzyme 1.
  
 
 0.806
ENSCWAP00000004227
annotation not available
  
 
 0.762
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
  
 
 0.762
KIAA0513
KIAA0513.
  
 
 0.762
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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