Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PERPP53 apoptosis effector related to PMP22. (193 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
    
 0.911
TP63
Tumor protein p63.
    
 0.880
PKP3
Plakophilin 3.
   
 
 0.858
PKP1
Plakophilin 1.
   
 
 0.857
TP73
Tumor protein p73.
    
 0.853
DSG1
Desmoglein 1.
     
 0.816
PKP2
Plakophilin 2.
   
 
 0.809
JUP
Junction plakoglobin.
   
 
 0.789
MACF1
Microtubule actin crosslinking factor 1.
   
 
 0.776
DST
Dystonin.
   
 
 0.776
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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