Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMIGO1Adhesion molecule with Ig like domain 1. (491 aa)    
Predicted Functional Partners:
MRPS21
Mitochondrial ribosomal protein S21.
    
 
 0.598
EXD3
Exonuclease 3'-5' domain containing 3.
    
 
 0.596
HOMER1
Homer scaffold protein 1.
    
 
 0.595
GRIPAP1
GRIP1 associated protein 1.
      
 0.588
EPB41L1
Erythrocyte membrane protein band 4.1 like 1.
      
 0.583
TYSND1
Trypsin domain containing 1.
      
 0.582
GPHN
Gephyrin.
      
 0.582
NTNG1
Netrin G1.
    
 0.574
TONSL
Tonsoku like, DNA repair protein.
    
  0.544
MCF2L2
MCF.2 cell line derived transforming sequence-like 2.
      
 0.537
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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