Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000002777annotation not available (410 aa)    
Predicted Functional Partners:
DDX28
DEAD-box helicase 28.
  
 
 0.975
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
   
 
 0.955
MRPS30
Mitochondrial ribosomal protein S30.
   
 
 0.953
MRPL39
Mitochondrial ribosomal protein L39.
  
 
 0.953
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.949
MRPL28
Mitochondrial ribosomal protein L28.
    
   0.948
GTPBP10
GTP binding protein 10.
  
 
 0.917
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.907
MRPL11
Mitochondrial ribosomal protein L11.
   
 
 0.904
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.903
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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