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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYB561D1Cytochrome b561 family member D1. (229 aa)    
Predicted Functional Partners:
BCCIP
BRCA2 and CDKN1A interacting protein.
    
 
 0.769
SNX22
Sorting nexin 22.
      
 0.748
SUOX
Sulfite oxidase.
     
 0.687
EFNA4
Ephrin A4.
      
 0.686
ENSCWAP00000006376
annotation not available
    
 0.659
PTTG1IP
PTTG1 interacting protein.
      
 0.651
KCTD21
Potassium channel tetramerization domain containing 21.
   
   0.629
TCF12
Transcription factor 12.
    
 
 0.629
ENSCWAP00000016681
annotation not available
    
 0.605
BNIP3L
BCL2 interacting protein 3 like.
      
 0.599
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.