SOD1 protein (Catagonus wagneri) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

SOD1

Superoxide dismutase 1. (152 aa)

Predicted Functional Partners:

ENSCWAP00000004036

0.993

PARK7

0.980

CCS

0.979

CAT

0.970

HSPA5

0.952

BCL2

0.950

PPARGC1A

0.938

VDAC1

0.935

NEFL

0.925

DERL1

0.919

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCL2	ENSCWAP00000004036	ENSCWAP00000011595	ENSCWAP00000004036	BCL2 apoptosis regulator.	annotation not available	0.611
BCL2	HSPA5	ENSCWAP00000011595	ENSCWAP00000020567	BCL2 apoptosis regulator.	Heat shock protein family A (Hsp70) member 5.	0.601
BCL2	PARK7	ENSCWAP00000011595	ENSCWAP00000005138	BCL2 apoptosis regulator.	Parkinsonism associated deglycase.	0.631
BCL2	PPARGC1A	ENSCWAP00000011595	ENSCWAP00000028762	BCL2 apoptosis regulator.	PPARG coactivator 1 alpha.	0.491
BCL2	SOD1	ENSCWAP00000011595	ENSCWAP00000002789	BCL2 apoptosis regulator.	Superoxide dismutase 1.	0.950
BCL2	VDAC1	ENSCWAP00000011595	ENSCWAP00000001072	BCL2 apoptosis regulator.	Voltage dependent anion channel 1.	0.974
CAT	ENSCWAP00000004036	ENSCWAP00000029151	ENSCWAP00000004036	Catalase.	annotation not available	0.962
CAT	PARK7	ENSCWAP00000029151	ENSCWAP00000005138	Catalase.	Parkinsonism associated deglycase.	0.863
CAT	SOD1	ENSCWAP00000029151	ENSCWAP00000002789	Catalase.	Superoxide dismutase 1.	0.970
CCS	ENSCWAP00000004036	ENSCWAP00000013665	ENSCWAP00000004036	Copper chaperone for superoxide dismutase.	annotation not available	0.952
CCS	SOD1	ENSCWAP00000013665	ENSCWAP00000002789	Copper chaperone for superoxide dismutase.	Superoxide dismutase 1.	0.979
DERL1	HSPA5	ENSCWAP00000020333	ENSCWAP00000020567	Derlin 1.	Heat shock protein family A (Hsp70) member 5.	0.953
DERL1	SOD1	ENSCWAP00000020333	ENSCWAP00000002789	Derlin 1.	Superoxide dismutase 1.	0.919
ENSCWAP00000004036	BCL2	ENSCWAP00000004036	ENSCWAP00000011595	annotation not available	BCL2 apoptosis regulator.	0.611
ENSCWAP00000004036	CAT	ENSCWAP00000004036	ENSCWAP00000029151	annotation not available	Catalase.	0.962
ENSCWAP00000004036	CCS	ENSCWAP00000004036	ENSCWAP00000013665	annotation not available	Copper chaperone for superoxide dismutase.	0.952
ENSCWAP00000004036	HSPA5	ENSCWAP00000004036	ENSCWAP00000020567	annotation not available	Heat shock protein family A (Hsp70) member 5.	0.575
ENSCWAP00000004036	PARK7	ENSCWAP00000004036	ENSCWAP00000005138	annotation not available	Parkinsonism associated deglycase.	0.863
ENSCWAP00000004036	PPARGC1A	ENSCWAP00000004036	ENSCWAP00000028762	annotation not available	PPARG coactivator 1 alpha.	0.953
ENSCWAP00000004036	SOD1	ENSCWAP00000004036	ENSCWAP00000002789	annotation not available	Superoxide dismutase 1.	0.993