Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XRRA1X-ray radiation resistance associated 1. (788 aa)    
Predicted Functional Partners:
GASK1B
Golgi associated kinase 1B.
      
 0.810
ATE1
Arginyltransferase 1.
      
 0.754
BICRA
BRD4 interacting chromatin remodeling complex associated protein.
    
 
 0.742
CELF4
CUGBP Elav-like family member 4.
      
 0.692
TBC1D22A
TBC1 domain family member 22A.
      
 0.686
TMEM200C
Transmembrane protein 200C.
      
 0.662
SLC9A8
Solute carrier family 9 member A8.
      
 0.652
LRRC4C
Leucine rich repeat containing 4C.
   
  
 0.641
GLRB
Glycine receptor beta.
      
 0.639
TMEM45A
Transmembrane protein 45A.
      
 0.610
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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