STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX2Sorting nexin 2. (521 aa)    
Predicted Functional Partners:
SNX1
Sorting nexin 1.
  
0.999
SNX5
Sorting nexin 5.
   
0.997
VPS35
VPS35 retromer complex component.
   
 0.996
VPS26B
VPS26, retromer complex component B.
   
 0.989
VPS26A
VPS26, retromer complex component A.
   
 0.989
SNX6
Sorting nexin 6.
   
0.984
ENSCWAP00000013964
annotation not available
   
 0.981
ENSCWAP00000020836
annotation not available
   
 0.981
SNX27
Sorting nexin 27.
    
 0.974
SNX32
Sorting nexin 32.
   
 0.973
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.