Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KPNA3Karyopherin subunit alpha 3. (521 aa)    
Predicted Functional Partners:
KPNA4
Karyopherin subunit alpha 4.
  
0.999
KPNB1
Karyopherin subunit beta 1.
   
 0.995
RELA
RELA proto-oncogene, NF-kB subunit.
    
 0.988
CSE1L
Chromosome segregation 1 like.
   
 0.979
NFKB1
Nuclear factor kappa B subunit 1.
    
  0.975
KPNA1
Karyopherin subunit alpha 1.
  
0.970
RCC1
Regulator of chromosome condensation 1.
   
 
 0.955
RELB
RELB proto-oncogene, NF-kB subunit.
    
 0.927
LARP7
La ribonucleoprotein 7, transcriptional regulator.
    
 
 0.927
NCBP2L
Nuclear cap binding protein subunit 2 like.
    
 
 0.923
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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