STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDNFCerebral dopamine neurotrophic factor. (187 aa)    
Predicted Functional Partners:
MANF
Mesencephalic astrocyte derived neurotrophic factor.
    
   0.945
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 
 0.939
NRTN
Neurturin.
      
 0.801
PSPN
Persephin.
      
 0.754
LRRC30
Leucine rich repeat containing 30.
   
    0.747
ENSCWAP00000024051
annotation not available
   
 
 0.732
PSAP
Prosaposin.
      
 0.667
SSR3
Signal sequence receptor subunit 3.
   
  
 0.662
ENSCWAP00000003315
annotation not available
      
 0.623
ENSCWAP00000021022
annotation not available
   
  
 0.616
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.