STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNCBSynuclein beta. (134 aa)    
Predicted Functional Partners:
SNCA
Synuclein alpha.
   
 
 0.981
SNCG
Synuclein gamma.
   
 
 0.865
SNCAIP
Synuclein alpha interacting protein.
    
 
 0.688
CPLX1
Complexin 1.
   
  
 0.647
ENSCWAP00000010752
annotation not available
   
  
 0.631
UNC5A
Unc-5 netrin receptor A.
   
  
 0.628
SLC30A9
Solute carrier family 30 member 9.
      
 0.570
TSTA3
Tissue specific transplantation antigen P35B.
      
 0.564
PLP1
Proteolipid protein 1.
   
  
 0.558
MTF1
Metal regulatory transcription factor 1.
    
  0.535
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.