STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COBLL1Cordon-bleu WH2 repeat protein like 1. (1170 aa)    
Predicted Functional Partners:
PACSIN1
Protein kinase C and casein kinase substrate in neurons 1.
    
 
 0.800
PACSIN3
Protein kinase C and casein kinase substrate in neurons 3.
    
 
 0.788
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
    
 
 0.773
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.704
ENSCWAP00000006444
annotation not available
    
 0.704
GRAP2
GRB2 related adaptor protein 2.
    
 0.704
GRB2
Growth factor receptor bound protein 2.
    
 0.704
MST1R
Macrophage stimulating 1 receptor.
    
 0.704
F12
Coagulation factor XII.
    
  0.692
HGFAC
HGF activator.
    
  0.692
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.