Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TIMM22Translocase of inner mitochondrial membrane 22. (194 aa)    
Predicted Functional Partners:
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.990
TIMM9
Translocase of inner mitochondrial membrane 9.
   
 0.989
TIMM29
Translocase of inner mitochondrial membrane 29.
   
 0.979
NDUFA8
NADH:ubiquinone oxidoreductase subunit A8.
   
 
 0.971
ENSCWAP00000029038
annotation not available
   
 0.967
ENSCWAP00000009027
annotation not available
   
 0.937
ENSCWAP00000025618
annotation not available
   
 0.937
ENSCWAP00000004319
annotation not available
   
 0.931
AGK
Acylglycerol kinase.
   
 0.931
PAX4
Paired box 4.
    
 0.915
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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