Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF169Ring finger protein 169. (709 aa)    
Predicted Functional Partners:
DYRK1A
Dual specificity tyrosine phosphorylation regulated kinase 1A.
   
 
 0.965
USP7
Ubiquitin specific peptidase 7.
    
 
 0.957
DCAF7
DDB1 and CUL4 associated factor 7.
   
 
 0.952
UBB
Ubiquitin B.
    
  0.950
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.939
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.938
BRCA1
BRCA1 DNA repair associated.
    
 0.937
RNF168
Ring finger protein 168.
    
 
 0.910
ENSCWAP00000002640
annotation not available
    
 0.897
ENSCWAP00000020442
annotation not available
    
 0.897
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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