STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHGDHPhosphoglycerate dehydrogenase. (533 aa)    
Predicted Functional Partners:
PSAT1
Phosphoserine aminotransferase 1.
  
 0.998
SHMT2
Serine hydroxymethyltransferase 2.
  
 
 0.949
PSPH
Phosphoserine phosphatase.
  
 0.931
EPN3
Epsin 3.
    
   0.923
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
 0.922
PGAM1
Phosphoglycerate mutase 1.
   
 0.907
PGAM2
Phosphoglycerate mutase 2.
    
 0.897
BPGM
Bisphosphoglycerate mutase.
    
 0.897
ENSCWAP00000023166
annotation not available
  
 0.894
LDHD
Lactate dehydrogenase D.
    
 0.878
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.