STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHGDHPhosphoglycerate dehydrogenase. (533 aa)    
Predicted Functional Partners:
PSAT1
Phosphoserine aminotransferase 1.
  
 0.998
SHMT2
Serine hydroxymethyltransferase 2.
  
 0.970
PSPH
Phosphoserine phosphatase.
  
 0.938
SHMT1
Serine hydroxymethyltransferase 1.
  
 0.936
PGAM1
Phosphoglycerate mutase 1.
   
 0.934
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
 0.918
PGAM2
Phosphoglycerate mutase 2.
   
 0.916
BPGM
Bisphosphoglycerate mutase.
   
 0.916
GLDC
Glycine decarboxylase.
  
 
 0.914
ENSCWAP00000023166
annotation not available
  
 0.885
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.