STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D. (283 aa)    
Predicted Functional Partners:
TAF1C
TATA-box binding protein associated factor, RNA polymerase I subunit C.
    
 0.999
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A.
    
 0.999
TBP
TATA-box binding protein.
    
 0.987
TBPL2
TATA-box binding protein like 2.
    
 0.973
HINT1
Histidine triad nucleotide binding protein 1.
    
 0.949
HINT2
Histidine triad nucleotide binding protein 2.
    
 0.949
UBTF
Upstream binding transcription factor.
    
 0.917
UBN2
Ubinuclein 2.
    
 0.916
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.911
EAF1
ELL associated factor 1.
    
   0.889
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.