STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM13Tripartite motif containing 13. (407 aa)    
Predicted Functional Partners:
TRIM63
Tripartite motif containing 63.
   
  0.904
TRIM55
Tripartite motif containing 55.
   
 
 0.846
STAT3
Signal transducer and activator of transcription 3.
    
 
 0.845
SQSTM1
Sequestosome 1.
    
 0.830
ZDHHC22
Zinc finger DHHC-type containing 22.
    
   0.762
TRIM23
Tripartite motif containing 23.
    
 
 0.730
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.684
SPRYD7
SPRY domain containing 7.
    
 
 0.659
TCAP
Titin-cap.
   
 
 0.599
OTUD7A
OTU deubiquitinase 7A.
    
 
 0.597
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.