STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDM6PR/SET domain 6. (589 aa)    
Predicted Functional Partners:
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
    
 
 0.951
PRDM14
PR/SET domain 14.
    
 
 0.948
SMYD2
SET and MYND domain containing 2.
    
 0.903
NSD3
Nuclear receptor binding SET domain protein 3.
    
 0.876
SYCE3
Synaptonemal complex central element protein 3.
    
   0.876
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
     
  0.867
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
     
 0.867
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
     
  0.866
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
  0.866
SMYD3
SET and MYND domain containing 3.
    
 0.854
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.