STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCNRGPotassium channel regulator. (274 aa)    
Predicted Functional Partners:
ENSCWAP00000026989
annotation not available
    
 
 0.841
CUL3
Cullin 3.
    
 0.797
UBXN1
UBX domain protein 1.
    
 
 0.738
FAF1
Fas associated factor 1.
    
 
 0.719
RND2
Rho family GTPase 2.
    
 0.624
ENSCWAP00000005035
annotation not available
    
 0.567
RHOB
Ras homolog family member B.
    
 0.567
RND3
Rho family GTPase 3.
    
 0.567
RHOA
Ras homolog family member A.
    
 0.567
RND1
Rho family GTPase 1.
    
 0.567
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.