STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHRDL2Chordin like 2. (430 aa)    
Predicted Functional Partners:
ANGPTL8
Angiopoietin like 8.
    
   0.805
RMND5A
Required for meiotic nuclear division 5 homolog A.
    
   0.758
BMP4
Bone morphogenetic protein 4.
    
 0.744
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
  0.631
BMP2
Bone morphogenetic protein 2.
    
 0.603
TWSG1
Twisted gastrulation BMP signaling modulator 1.
      
 0.596
LVRN
Laeverin.
      
 0.587
FSTL3
Follistatin like 3.
      
 0.570
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.553
TNN
Tenascin N.
    
 0.541
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.