Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SORT1Sortilin 1. (833 aa)    
Predicted Functional Partners:
NGFR
Nerve growth factor receptor.
    
 0.997
SORCS1
Sortilin related VPS10 domain containing receptor 1.
    
 0.986
NGF
Nerve growth factor.
    
 
 0.985
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.980
GRN
Granulin precursor.
    
 
 0.978
BDNF
Brain derived neurotrophic factor.
    
 
 0.977
NTS
Neurotensin.
    
 
 0.977
SORCS2
Sortilin related VPS10 domain containing receptor 2.
    
 0.970
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 
 0.966
SORCS3
Sortilin related VPS10 domain containing receptor 3.
    
 0.958
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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