STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRIP3Nuclear receptor interacting protein 3. (240 aa)    
Predicted Functional Partners:
TBC1D30
TBC1 domain family member 30.
    
 
 0.845
RNF182
Ring finger protein 182.
   
  
 0.748
LHFPL2
LHFPL tetraspan subfamily member 2.
      
 0.721
ZDHHC2
Zinc finger DHHC-type palmitoyltransferase 2.
      
 0.701
OCIAD2
OCIA domain containing 2.
      
 0.675
ENSCWAP00000005173
annotation not available
      
 0.664
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 
 0.643
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 
 0.643
ARHGAP12
Rho GTPase activating protein 12.
      
 0.626
RSC1A1
Regulator of solute carriers 1.
   
   0.622
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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