Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFDP1Craniofacial development protein 1. (299 aa)    
Predicted Functional Partners:
ENSCWAP00000005052
annotation not available
    
 0.986
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.979
RUVBL1
RuvB like AAA ATPase 1.
   
 0.971
RUVBL2
RuvB like AAA ATPase 2.
    
 0.961
EP400
E1A binding protein p400.
    
 0.955
VPS72
Vacuolar protein sorting 72 homolog.
   
 
 0.953
YEATS4
YEATS domain containing 4.
   
 
 0.951
ZNHIT1
Zinc finger HIT-type containing 1.
    
 
 0.950
ACTR6
Actin related protein 6.
   
 
 0.934
ACTL6A
Actin like 6A.
    
 0.895
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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