close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPME1Protein phosphatase methylesterase 1. (400 aa)    
Predicted Functional Partners:
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
 0.984
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
    
 0.984
PPP2R1B
Protein phosphatase 2 scaffold subunit Abeta.
    
 0.983
PPP2R1A
Protein phosphatase 2 scaffold subunit Aalpha.
    
 0.981
MRPS12
Mitochondrial ribosomal protein S12.
     
 0.883
MRPS9
Mitochondrial ribosomal protein S9.
     
 0.882
METTL17
Methyltransferase like 17.
     
 0.881
MRPS16
Mitochondrial ribosomal protein S16.
    
  0.879
MRPS6
Mitochondrial ribosomal protein S6.
    
 0.867
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 0.860
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.